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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015813300.1_cds_XP_016497500.1_11618
CDS Infomation

[gene=LOC107816318] [db_xref=GeneID:107816318] [protein=DNA (cytosine-5)-methyltransferase DRM2-like] [protein_id=XP_016497500.1] [location=complement(join(3442..3870,4039..4761,4895..4986,5307..5424,6026..6175,6668..6711,6788..6887,7099..7245,7418..7420))] [gbkey=CDS]
Sequence

ATGGACAACAATCTTTCTGGAGAAGACAATGACAACATTGACTGGGATACTGAAGATGAG
TTAGAAATACAAGAAATACAGGACACAACATTTTCCTCATACACGGATTTAAGAACTACA
GGACAGCACGCTATTAGTTGTGGTGGGGAGGCAAGCTCATCATCAGTATCCTCCAAGTCC
AAGTTCATTCAGCAGTTTGTAGTGATGGGATTTCGTGAAGAATCTATTGCAAAAGCAATA
GAGCAAAATGGAGAAAATGAAGGTTTGGTGCTGGATGCTCTTTTGACATTGAAGGCCCTT
GAAGACTCTCCTGAAGAACAGCCTAATACTAGCTCTCAGCTGGAGTCCCGCATTAGTTCC
GATGATAGCTCTTCTGAATACAACGAGAACTTTCTGGATGATGATTATGAGGAAGATAGT
TGGTCCTCAGACTCGGACACTATAAATTCTGCAAAACAATGCTACTTGAAAGACGAGAGC
AGTTCTTTGTCTGAAAAAGAGCAACTGCTGGTAAATATGGGATACCCAGTGGAGGAGGCT
TCCATAGCAATGGAGAGATGTGGTCCAGGAGCTTCGCTTGTTGAATTGACAGATTTCATC
TACGCTGCTCAAATGGCAAGAGAAGAAGATGCCTATCTGCCAGAAGATGTAAAGCCAAAA
CTAAAGCATATGTTGAATGGTAGTGGTGGATCCATGAAGAGGACGTTGTATAATGAATTA
CGCAAAAGGAAAAAGCAAAGGGTGATTTGTGATGAAGAGACAATTCGATTGCCAAAACAT
ATGATTGGATACGGTATTCCTACCGAATCAGTTTCATCAATGGTCAAAAGAACTCTTCCG
GAGCAAGCTATTGGGCCCCCATTTTTCTATTATGAAAACGTTGCTCTAGCTCCGAAGGGT
GTGTGGGACACCATTTCCAGATTCTTGTATGATATTGAGCCTGAGTTTGTTGACTCAAAA
TATTTTTGTGCCACTGCAAGAAAAAGGGGATATGTTCATAATCTGCCCGTTGAAAATAGA
TTTCCTTTGCTTCCACTTCCCCCATGTACCATTCATGAAGCATTTCCCCTGACAAAGAAA
TGGTGGCCATCTTGGGATACACGAACACAGTTAAATTGTTTGCAAACATCCATTGCAAGT
GCAAGATTGACTGATAGAATCAGGAAAGCTATGGAGGACTTTGATGGTGAGCCACCTATG
AGAGTGCAGAAGTATGTTCTTGATGAATGTCGGAAGTGGAATTTGGTATGGGTTGGGAGA
AACAAAGTTGCTCCTTTGGAGCCTGATGAAGTTGAAATGCTATTAGGGTTTCCAAAGAAC
CATACCAGGGGTATAAGTAGGACCGATAGATACAAGTCGCTTGGTAACTCGTTCCAGATT
GATACAGTGGCATACCATTTGTCGGTGTTGAAAGAAAAGTTTCCAGATGGTATCAACGTC
TTATCACTCTTCTCTGGAATTGGCGGTGCTGAAGTTGCTCTTTACCGTCTCGGTATTCGA
TTGAAGAATGTGATTTCCGTGGAAATATGTGAAGTCAACAGAAATATTATGAGAAGCTGG
TGGGAGCAGACTAACCAGAGAGGGAATCTTATAGAGTTTGACGATGTGCAGCAGCTGGAT
GGAGATTGCTTGGAGCGGCTCATAGATTCATATGGAAGGTTTGATCTAGTAATTGGTGGA
AGCCCGTGCAACAATCTTACAGGAAGCAATAGGGTGAGCAGGGATGGGCTTGAGGGCAAA
GAATCTTCTCTATTTTTTCACTATGTTCGGATACTGGATTTGGTGAAGTTAATAATGTCC
AGATGA

Peptide Sequence

PEP ID

XP_016497500.1
PEP Infomation

PREDICTED: DNA (cytosine-5)-methyltransferase DRM2-like [Nicotiana tabacum]
Sequence

MDNNLSGEDNDNIDWDTEDELEIQEIQDTTFSSYTDLRTTGQHAISCGGEASSSSVSSKS
KFIQQFVVMGFREESIAKAIEQNGENEGLVLDALLTLKALEDSPEEQPNTSSQLESRISS
DDSSSEYNENFLDDDYEEDSWSSDSDTINSAKQCYLKDESSSLSEKEQLLVNMGYPVEEA
SIAMERCGPGASLVELTDFIYAAQMAREEDAYLPEDVKPKLKHMLNGSGGSMKRTLYNEL
RKRKKQRVICDEETIRLPKHMIGYGIPTESVSSMVKRTLPEQAIGPPFFYYENVALAPKG
VWDTISRFLYDIEPEFVDSKYFCATARKRGYVHNLPVENRFPLLPLPPCTIHEAFPLTKK
WWPSWDTRTQLNCLQTSIASARLTDRIRKAMEDFDGEPPMRVQKYVLDECRKWNLVWVGR
NKVAPLEPDEVEMLLGFPKNHTRGISRTDRYKSLGNSFQIDTVAYHLSVLKEKFPDGINV
LSLFSGIGGAEVALYRLGIRLKNVISVEICEVNRNIMRSWWEQTNQRGNLIEFDDVQQLD
GDCLERLIDSYGRFDLVIGGSPCNNLTGSNRVSRDGLEGKESSLFFHYVRILDLVKLIMS
R

Transcript Sequence

Gene sequence data has not been registered.